CDS

Accession Number TCMCG066C08090
gbkey CDS
Protein Id XP_034580449.1
Location join(39550481..39550591,39551823..39552026,39552101..39552136,39552225..39552337,39553497..39553542,39554098..39554144,39554259..39554366,39554566..39554641,39555530..39555602,39555697..39555842,39555949..39556034,39556412..39556471,39556619..39556758,39556827..39556966,39557045..39557095,39557436..39557499,39558093..39558236,39558832..39558899,39559008..39559066,39559160..39559316,39560209..39560261,39560343..39560441,39560708..39560732)
Gene LOC117843835
GeneID 117843835
Organism Setaria viridis

Protein

Length 701aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034724558.1
Definition DNA mismatch repair protein MSH4 isoform X3 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08740        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGAAGGACGGCGCCGCTGGAGCCGACGGAGGCGGAGGCCACGGAGGAGGAGGAGGAGGCGGAGAGGGGTCGAGCTTCGTGATCGGCCTCATCGAGAACCGCGCCAAGGAGGTTGGCGTTGCGGCCTTTGATTTGAGATCAGCTGCGCTGCACCTATCTCAGTATATTGAGACAAGTCGCTCATACCACAATACAAAAACACTACTTCATTTCTATGATCCCATGGTTGTCATTGTGCCCCCAAACAAAACAGCAGCAGATGGTATGGTTGGAGTTTCAGAGCTGGTAGGTAAACATTACCCAGCAAACAAAAAGGTCACAATGGCACGTGGTTGCTTTGATGATACGAAGGGTGCTGTCATGGTGAAAAATCTTTCAGCTAGAGACCCATCTGCGCTTGGTTTAGACACTTACTGCAAGCAGTATTATCTTTGTCTTGCGGCTGCCTCTGCAACAATTAGGTGGATAGAATCAGAAAGGGGTGTATTTATTACCAACCACTCATTATCAGTTACATTCAATGGGTCATTCGACCATATGAACATTGACTCAACTAGTGTTCAAACATTGGAGATTATTGATCCTCTCCATACTGAACTATGGGGCACAAGCAACAAAAAGAAAAGCCTCTTTCAGATGTTGAAAACTACAAAGACTACAGGAGGGGCCAGACTTCTGAGAGCCAACTTATTACAGCCATTGAAAGATATTCAGACCATCAATGCTCGTCTAGACTGCTTGGATGAGCTAGTGACCAACGAGGAACTGTTTTTCGGATTGACTCAAGGTCTTCGTAAGTTTCCAAAAGAATCAGATAAGGTTCTCTGTCATTTCTGCTTCAAGCCCAAACCGGTTACGGATGAGGTATTGAAGCCTGCCAATGGTAGAAAGAGCCAGATGCTGATTTCTGATATTATTATTCTAAAGACTGCTCTGGACGCCATACCATTCTTCTCCAAGGTTTTGAAGGGAGCAAAGAGTTTTCTCCTTCGCAACATTTATCAGACTGTATGTGAAAACCCTAAATATGAAAATATGAGAAAGAGAAGCAGTTATGTTTGTATATCATCAAGAATAATGATTACGCATTGTATCCTTAAAATCAGAATTGGAGATATCATTGACGAGGATGTGGTTCATTCAAGGGCTCCATTTGTAGCCTGCACTCAGCAATGTTTTGCTATTAAGGCAGGAGTTGATGGGCTGCTTGATGTTGCTCGTCGATCTTTCTGTGATACCAGCGAAGCCATACATAACCTCGCCAACAAGTACAGGGAAGAATATAATATGCCGACTCTGAAGATACCCTATAATATTAGGCAAGGATTTTACTTCATTATACCCCAGAAGGACATTACTGATAGGCTTCCTAATAAATTTATCCAGGTTGTTAGACATGGGAAGAATGTCCACTGCTCAAGCTTGGAGCTTGCTTCTCTAAATGTTAGGAACAAGTCAGCTGCTGCTGAGTGCTTCTTCCGCACGGAACTTTGTTTGGAAGGTCTTATTGACAAGATCAGAGAAGACATTGGTATCCTTACATTGCTCGCTGAAGTATTGTGTCTATTGGACATGATTGTAAACTCTTTTGCTCATACAATATCTACAAAGCCTGTTGATCGCTACACAAGACCGGAGTTCACAGATGATGGCCCAATGGCAATCAATGCTGGACGACATCCTATTCTGGAGACTTTGCATACTGATTTTGTTCCTAACAATACATTTCTCTCTGAAGCATCCAATATGGTTCTTGTCATGGGGCCAAATATGAGTGGCAAAAGCACATATCTCCATCAGATATGTTTAATTGTCATTCTTGCACAAATTGGCTGTTATGTTCCAGCTCAGTTTGCATCATTAAGAGTGGTTGATCGCATATTCACGCGGATTGGCAATGGGGATAATGTTGAAAACAACTCAAGTACGTTTATGACAGAAATGAAAGAAACAGCTTTCATCATGCAGAATGCTTCTTCAAAGAGCTTGATTGTTGTGGATGAGCTTGGAAGGGCAACATCTTCCGCTGATGGGTTGGCAATTGCATGGAGCTGCTGTGAACACCTTCTTTCTGTCAAAGCAATCCATGATGTAGTTTTTCTGTGA
Protein:  
MKDGAAGADGGGGHGGGGGGGEGSSFVIGLIENRAKEVGVAAFDLRSAALHLSQYIETSRSYHNTKTLLHFYDPMVVIVPPNKTAADGMVGVSELVGKHYPANKKVTMARGCFDDTKGAVMVKNLSARDPSALGLDTYCKQYYLCLAAASATIRWIESERGVFITNHSLSVTFNGSFDHMNIDSTSVQTLEIIDPLHTELWGTSNKKKSLFQMLKTTKTTGGARLLRANLLQPLKDIQTINARLDCLDELVTNEELFFGLTQGLRKFPKESDKVLCHFCFKPKPVTDEVLKPANGRKSQMLISDIIILKTALDAIPFFSKVLKGAKSFLLRNIYQTVCENPKYENMRKRSSYVCISSRIMITHCILKIRIGDIIDEDVVHSRAPFVACTQQCFAIKAGVDGLLDVARRSFCDTSEAIHNLANKYREEYNMPTLKIPYNIRQGFYFIIPQKDITDRLPNKFIQVVRHGKNVHCSSLELASLNVRNKSAAAECFFRTELCLEGLIDKIREDIGILTLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPEFTDDGPMAINAGRHPILETLHTDFVPNNTFLSEASNMVLVMGPNMSGKSTYLHQICLIVILAQIGCYVPAQFASLRVVDRIFTRIGNGDNVENNSSTFMTEMKETAFIMQNASSKSLIVVDELGRATSSADGLAIAWSCCEHLLSVKAIHDVVFL